PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN27140.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 287aa    MW: 31108.6 Da    PI: 8.8844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN27140.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.8e-11221266655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  KHN27140.1 221 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 266
                 689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.005215265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.16E-15218280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.16E-11219270No hitNo description
Gene3DG3DSA:4.10.280.103.5E-14220279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-8221266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-13221271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MYPSSSSSSS SSSSQSMTQA GLTRYGSAPG SLLTSTVDSL IGGSRPSPYF SGESSESPCK  60
EQRSFHNHPP SFASSLLRQK SSPAGFLSHL SNHHGVGFTI TPGGLSNSNS NSNCSLLKSQ  120
LSFTHESLSN TVNVDPSSTT FGMDPWDNNS IAFSATSTKR SKTNTNDPDI LHSLNSALES  180
QFNLPHTSLE MSTVDKLLHI PEDSVPCKIR AKRGCATHPR SIAERERRTR ISGKLKKLQD  240
LVPNMDKQTS YADMLDLAVQ HIKGLQTQVQ KLHKEMENCT CGCKQSK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003556577.10.0PREDICTED: transcription factor bHLH128-like
SwissprotQ8H1022e-68BH128_ARATH; Transcription factor bHLH128
TrEMBLA0A0B2R0460.0A0A0B2R046_GLYSO; Transcription factor bHLH128
STRINGGLYMA20G39220.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76803140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-62bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]